Andresen, M., M. C. Wahl, A. Stiel, F. Gräter, L. V. Schäfer, S. Trowitzsch, G. Weber, C. Eggeling, H. Grubmüller, S. W. Hell, S. Jakobs: "Structure and mechanism of the reversible photoswitch of a fluorescent protein". PNAS  102, 13070-13074
Hofmann, M., C. Eggeling, S. Jakobs, S. W. Hell: "Breaking the diffraction barrier in fluorescence microscopy at low light intensities by using reversibly photoswitchable proteins". PNAS  102, 17565-17569
Kastrup, L., H. Blom, C. Eggeling, S. W. Hell: "Fluorescence Fluctuation Spectroscopy in Subdiffraction Focal Volumes". Phys. Rev. Lett.  94, 178104 (4 pp.)
Westphal, V., S. W. Hell: "Nanoscale Resolution in the Focal Plane of an Optical Microscope". Phys. Rev. Lett.  94, 143903 (4 pp.)
Egner, A., S. W. Hell: "Fluorescence microscopy with super-resolved optical sections". Trends Cell Biol.  15, 207-215
Dimmer, K. S., S. Jakobs, F. Vogel, K. Altmann, B. Westermann: "Mdm31 and Mdm32 are inner membrane proteins required for maintenance of mitochondrial shape and stability of mitochondrial DNA nucleoids in yeast". J. Cell Biol.  168, 103-115
Eggeling, C., P. Kask, D. Winkler, S. Jäger: "Rapid Analysis of Förster Resonance Energy Transfer by Two-Color Global Fluorescence Correlation Spectroscopy: Trypsin Proteinase Reaction". Biophys. J.  89, 605-618
Eggeling, C., A. Volkmer, C. A. M. Seidel: "Molecular Photobleaching kinetics of Rhodamine 6G by one- and two-photon induced confocal fluorescence microscopy". ChemPhysChem  6, 791-804
Dyba, M., J. Keller, S. W. Hell: "Phase filter enhanced STED-4Pi fluorescence microscopy: theory and experiment". New J. Phys.  7, 134
Westphal, V., J. Seeger, T. Salditt and S. W. Hell: "Stimulated Emission Depletion Microscopy on Lithographic Nanostructures". Journal of Physics B: Atomic, Molecular   38, S695-S705
Turshatov, A. A., M. L. Bossi, D. Möbius, S. W. Hell, A. I. Vedernikov, S. P. Gromov, N. A. Lobova, M. V. Alfimov and S. Yu. Zaitsev: "Spectroscopic properties of an amphiphilic styryl pyridinium dye in Langmuir-Blodgett films". Thin Solid Films  467, 336-339
Sergeeva, T. I., S. P. Gromov, A. I. Vedernikov, M. S. Kapichnikova, M. V. Alfimov, V.-T. Lieu, D. Möbius, M. S. Tsarkova, S. Yu. Zaitsev: "Influence of the counter-anion on the interaction of cations with the benzodithia-18-crown-6 butadienyl dye in monolayers". Colloids Surfaces A  255, 201-209
Eggeling, C.: "Comparison of different fluorescence fluctuation methods for their use in FRET assays: Monitoring a protease reaction". Curr. Pharm. Biotech.  6, 351-371

Book Chapters

Hell, S. W.:  "Neues Gesetz zur Auflösung in der Lichtmikroskopie ermöglicht Bilder in bisher ungekannter Schärfe". In: Jahrbuch der Max-Planck-Gesellschaft 2005, Tätigkeitsberichte der Institute, Online.

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